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IMAT Biology · Formula sheet

Evolution and Ecology formulas

2 formulas, 9 reference tables and 14 common traps for IMAT Biology Evolution and Ecology, grouped by subtopic.

Full notes with worked examples

Natural Selection, Drift and Hardy-Weinberg

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The Hardy-Weinberg principle for allele and genotype frequencies

Hardy-Weinberg equations

p+q=1p2+2pq+q2=1p + q = 1 \qquad p^2 + 2pq + q^2 = 1
  • ppfrequency of the dominant allele
  • qqfrequency of the recessive allele
  • q2q^2frequency of homozygous recessive individuals (the visible recessive phenotype)
  • 2pq2pqfrequency of heterozygotes (carriers)

Darwin's natural selection, and why Lamarck's idea fails

StepWhat happensBacteria and an antibiotic
VariationIndividuals differ; much of it is geneticA few cells already carry a resistance allele (from a random mutation)
OverproductionMore offspring are made than can surviveBacteria multiply very fast
SelectionSome variants survive and reproduce betterThe antibiotic kills sensitive cells; resistant cells survive
InheritanceSurvivors pass their alleles onResistant cells divide and their offspring are resistant
Change over generationsFavoured alleles become more frequentThe infection becomes resistant; overuse and unfinished courses speed this up

Sources of variation and the forces that change allele frequencies

ForceRandom?Main effect
MutationYes: not directed by needAdds new alleles
Genetic driftYes: chance decides who breedsCan fix or lose alleles, even useful ones, in small populations
Gene flowNot driven by fitness; depends on who migratesBrings in alleles; makes populations more similar
Natural selectionNo: better-suited variants reproduce moreAdapts the population to its environment
Artificial selectionNo: humans pick the parentsExaggerates traits humans want

Directional, stabilising and disruptive selection

TypeFavouredEffect on the curveExample
DirectionalOne extremeMean shifts that wayDark peppered moths on sooty trees in industrial England
StabilisingThe middleNarrower, same meanHuman birth weight: very light and very heavy babies fared worst
DisruptiveBoth extremesSplits into two peaksFinches with large or small beaks where only large or small seeds exist
SexualTraits that attract matesShowy traits spreadThe peacock's tail

Common traps

Bacteria become resistant, not the patient

Antibiotic resistance is a property of the bacteria, selected when the drug kills their sensitive neighbours. People do not become resistant or immune to an antibiotic. Overuse and not finishing a course both help resistant bacteria take over.

Selection works in stable environments and on asexual organisms

In a stable environment, selection keeps removing the extremes (stabilising selection). Asexual organisms such as bacteria vary through mutation, so they are selected too. Any population with heritable variation is subject to natural selection.

Artificial selection is not a random process

Mutation and genetic drift are random. Artificial selection is the opposite: a breeder deliberately chooses which individuals reproduce. Natural selection is not random either, although the variation it acts on arises at random.

Only germ-line mutations matter to evolution

For a mutation to change the next generation it must be in a cell that makes gametes. A mutation in a body cell, dominant or recessive, however it was caused, is not passed on in animals.

Directional selection can favour a rare or a recessive phenotype

At the start, the favoured phenotype is often rare (dark moths were once uncommon). The allele behind it may be recessive, and its frequency still rises. Directional selection is defined by which end of the range is favoured, not by how common or how dominant it is.

The recessive phenotype gives q squared, not q

Individuals showing a recessive trait are aa, so their share is q2q^2. Take the square root to get qq. Using the phenotype percentage directly as the allele frequency is the commonest mistake, and IMAT includes that number among the options.

Speciation, Evidence for Evolution and Classification

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Species and speciation: isolation barriers, allopatric and sympatric

BarrierBefore or after the zygoteExample
HabitatBefore (prezygotic)Two species live in the same area but in different places, such as water and land
TemporalBefore (prezygotic)Breeding seasons or flowering times differ
BehaviouralBefore (prezygotic)Different courtship songs or displays, so mates are not recognised
Mechanical or gameticBefore (prezygotic)Reproductive parts do not fit, or sperm cannot fertilise the egg
Hybrid inviabilityAfter (postzygotic)The hybrid embryo dies early
Hybrid sterilityAfter (postzygotic)The mule, from a horse and a donkey, is sterile

Evidence for evolution: fossils, anatomy, embryos and molecules

EvidenceWhat it showsExample
Homologous structuresCommon ancestryPentadactyl limb: human arm, bat wing, whale flipper
Analogous structuresSimilar pressures, separate originsWings of birds and of insects
Vestigial structuresAncestors used the organHuman coccyx, hip bones inside whales
Comparative embryologyShared developmental planVertebrate embryos all have pharyngeal pouches and a tail
DNA and protein sequencesDegree of relationshipHuman and chimpanzee DNA differ by only a few per cent

Classification: the three domains, the ranks and binomial names

DomainCell typeKey featuresExamples
BacteriaProkaryoteNo nucleus; cell wall of peptidoglycan; 70S ribosomesE. coli, Streptococcus, cyanobacteria
ArchaeaProkaryoteNo nucleus; no peptidoglycan; unusual membrane lipids; many live in extreme placesMethanogens, salt-loving and heat-loving archaea
EukaryaEukaryoteNucleus and membrane-bound organelles; 80S ribosomes in the cytoplasmProtists, fungi, plants, animals

Common traps

Producing offspring is not enough to be one species

The test is fertile offspring in nature. Horses and donkeys produce mules, but mules are sterile, so horses and donkeys are separate species. A barrier that acts after the zygote forms is still reproductive isolation.

Similar function does not mean close relatives

Structures that do the same job but are built differently (analogous) evolved separately under similar conditions. Shared structure, not shared function, is what points to a common ancestor.

Archaea are not a kind of bacteria

Archaea look like bacteria under a microscope, but they form their own domain. They lack peptidoglycan and in several molecular features (such as how they copy and read DNA) they are closer to eukaryotes than to bacteria.

Ecosystems, Energy Flow, Nutrient Cycles and Interactions

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Energy flow between trophic levels and the 10% rule

Energy passed up a food chain

Ek+1≈0.1×Ekefficiency=Ek+1Ek×100%E_{k+1} \approx 0.1 \times E_{k} \qquad \text{efficiency} = \frac{E_{k+1}}{E_k} \times 100\%
  • EkE_kenergy at trophic level k (producers are level 1)
  • Ek+1E_{k+1}energy passed to the next level

Levels of ecological organisation and trophic levels

TermMeaningExample
PopulationAll individuals of one species in one areaThe perch in a lake
CommunityAll populations of all species in one areaEvery plant, animal and microbe in the lake
EcosystemA community plus its abiotic environmentThe lake with its water, mud, light and temperature
HabitatThe place where an organism livesShallow water among reeds
NicheThe role of a species: what it eats, when, where, and how it uses resourcesA perch hunting small fish by day near the surface

The carbon cycle and the nitrogen cycle

ProcessChangeDone by
Nitrogen fixationN2→NH3\mathrm{N_2} \rightarrow \mathrm{NH_3} or NH4+\mathrm{NH_4^+}Rhizobium in legume root nodules, free-living Azotobacter, cyanobacteria; also lightning and the industrial Haber process
AmmonificationProteins and urea in dead matter and waste →NH4+\rightarrow \mathrm{NH_4^+}Decomposers (bacteria and fungi)
NitrificationNH4+→NO2−→NO3−\mathrm{NH_4^+} \rightarrow \mathrm{NO_2^-} \rightarrow \mathrm{NO_3^-}Nitrosomonas (first step), Nitrobacter (second step)
AssimilationNO3−\mathrm{NO_3^-} and NH4+\mathrm{NH_4^+} taken up into amino acidsPlant roots, then animals by eating plants
DenitrificationNO3−→N2\mathrm{NO_3^-} \rightarrow \mathrm{N_2} back to the airAnaerobic bacteria such as Pseudomonas

Interactions between species and population growth

InteractionEffect on each speciesExample
CompetitionBoth harmedTwo plant species shading each other for light
PredationPredator gains, prey harmedLynx and snowshoe hare
ParasitismParasite gains, host harmedTapeworm in a human gut
MutualismBoth gainRhizobium in legume roots; the fungus and alga of a lichen
CommensalismOne gains, the other unaffectedBarnacles riding on a whale

Common traps

An ecosystem includes the non-living part

A community is only the living organisms. An ecosystem is the community together with its abiotic environment. Options that use the two words as if they meant the same are wrong.

Energy flows, matter cycles

Carbon and nitrogen atoms go round and round between organisms and the environment. Energy does not: it enters as light and leaves as heat. An option saying decomposers return energy to the producers is wrong; they return minerals.

Most energy is lost as heat from respiration

The roughly 90% that does not reach the next level is mainly used in respiration and lost as heat, with the rest in uneaten parts and faeces. It is not stored in the predator's body.

Nitrification is not nitrogen fixation

Fixation turns nitrogen gas into ammonia. Nitrification turns ammonium into nitrite and then nitrate. They are done by different bacteria, and only fixation brings new nitrogen in from the air.

A change that harms one competitor helps the other

If two species share a resource, anything that slows one of them (a temperature or pH it tolerates badly, or a chemical it is sensitive to) leaves more of the resource for the other, which then grows faster. The change does not need to act on the winner directly.

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